Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LAML rs6973626 chr7:135713238 T/C 1.49E-5 111 13.2 21.27 0 KM Plot
LAML rs6981060 chr8:8908235 C/A 0.000162 108 19.33 17.23 6.63 KM Plot
LAML rs6994131 chr8:8550958 G/A 5.21E-5 111 17.28 16.23 4.08 KM Plot
LAML rs7067716 chr10:134963559 G/A 7.01E-5 107 16.2 20.77 3 KM Plot
LAML rs7070876 chr10:955031 A/G 7.97E-5 109 15.23 13.1 5.1 KM Plot
LAML rs7089594 chr10:31013666 A/G 0.000176 111 1 6.58 16.2 KM Plot
LAML rs7092118 chr10:134963563 T/C 7.01E-5 107 16.2 20.77 3 KM Plot
LAML rs7093095 chr10:31013726 C/T 7.57E-5 111 1 6.13 16.23 KM Plot
LAML rs70949531 chr1:894890 A/AAGAC 0.000186 107 0 15.67 15.73 KM Plot
LAML rs7095851 chr10:134317745 A/C 0.000168 110 0 21.27 12.18 KM Plot
LAML rs7100671 chr10:43236268 C/T 0.000158 111 16.2 10.65 0 KM Plot
LAML rs7113008 chr11:58135332 G/A 1.82E-5 110 18.75 11.65 4.58 KM Plot
LAML rs7116173 chr11:93222311 C/T 5.96E-5 110 16.27 15.17 6.13 KM Plot
LAML rs71297554 chr19:12561910 T/TTATGCA 1.05E-5 111 6.63 21.82 13.1 KM Plot
LAML rs71338599 chr19:33420507 T/TA 8.56E-5 106 13.15 18.25 0.52 KM Plot